SNP Profiles of PNG 296 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	TT	CC	AC	GG	CC	GG	AA	GG	AA	CT	AG	AG	AA	CC
1._PNG_296	_	_	AC	GG	CC	_	AA	GG	AA	CT	_	_	AA	_
2._PNG_296	_	_	AC	GG	CC	_	AA	GG	AA	CT	_	_	AA	_
3._RUQ_1299	_	_	AC	GG	CC	_	AA	GG	AA	CT	_	_	AA	_
4._GC-01-113-6-10	TT	CC	AC	GG	CC	GG	AA	GG	AA	CT	AG	AG	AA	CC
5._GC-01-113-6-10	TT	CC	AC	GG	CC	GG	AA	GG	AA	CT	AG	AG	AA	CC
6._RUQ_1299	_	_	AC	_	_	_	_	_	AA	_	AG	_	_	_
7._GC-01-113-6-10	CT	CC	AA	GG	CC	GG	AA	CG	AG	CC	GG	AG	AA	CC
8._GC-01-113-6-10	CT	CC	AA	GG	CC	GG	AA	CG	AG	CC	GG	AG	AA	CC
9._GC-01-113-6-10	CT	CC	AA	GG	CC	GG	AA	CG	AG	CC	GG	AG	AA	CC
10._PNG_296	_	_	AA	GG	CC	_	AA	CG	AG	CC	_	_	AA	_
11._PNG_296	_	_	AA	GG	CC	_	AA	CG	AG	CC	_	_	AA	_
12._PNG_296	_	_	AA	GG	CC	_	AA	CG	AG	CC	_	_	AA	_
13._RUQ_1299	AA	CC	AC	CC	GG	GG	AA	CC	AA	AG	AG	AG	AA	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AA	CC	CC	TT	GG	AA	CC	CT	TT	GG	GG	TT	AC	CC
1._PNG_296	AA	CC	CC	TT	GG	AC	_	CT	_	GG	_	_	_	CC
2._PNG_296	AA	CC	CC	TT	GG	AC	_	CT	_	GG	_	_	_	CC
3._RUQ_1299	AA	CC	CC	TT	GG	AC	_	CT	_	GG	_	_	_	CC
4._GC-01-113-6-10	AA	CC	CC	TT	GG	AC	CC	CT	CC	GG	GG	TT	AC	CC
5._GC-01-113-6-10	AA	CC	CC	TT	GG	AC	CC	CT	CC	GG	GG	TT	AC	CC
6._RUQ_1299	_	AC	_	_	GG	AC	CC	_	TT	GG	GG	_	AC	CC
7._GC-01-113-6-10	AG	CC	CT	TT	GG	AA	CT	CC	CT	GG	GG	TT	CC	CC
8._GC-01-113-6-10	AG	CC	CT	TT	GG	AA	CT	CC	CT	GG	GG	TT	CC	CC
9._GC-01-113-6-10	AG	CC	CT	TT	GG	AA	CT	CC	CT	GG	GG	TT	CC	CC
10._PNG_296	AG	CC	CT	TT	GG	AA	_	CC	_	GG	_	_	_	CC
11._PNG_296	AG	CC	CT	TT	GG	AA	_	CC	_	GG	_	_	_	CC
12._PNG_296	AG	CC	CT	TT	GG	AA	_	CC	_	GG	_	_	_	CC
13._RUQ_1299	_	CC	_	AA	GG	AC	GG	AG	_	CC	GG	AA	AC	GG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	CC	GG	AG	CC	CT	GT	GG	AT	GT	TT	CC	CT	CC
1._PNG_296	_	CC	_	AG	_	CT	_	_	_	GT	_	_	CT	CC
2._PNG_296	_	CC	_	AG	_	CT	_	_	_	GT	_	_	CT	CC
3._RUQ_1299	_	CC	_	AG	_	CT	_	_	_	GT	_	_	CT	CC
4._GC-01-113-6-10	CG	CC	GG	AG	CC	CT	GT	GG	AT	GT	TT	CC	CT	CC
5._GC-01-113-6-10	CG	CC	GG	AG	CC	CT	GT	GG	AT	GT	TT	CC	CT	CC
6._RUQ_1299	_	_	GG	AG	CC	_	_	_	_	GT	_	_	_	CC
7._GC-01-113-6-10	CG	CT	GG	AG	CT	CT	GT	GG	AT	GT	TT	CC	CT	GG
8._GC-01-113-6-10	CG	CT	GG	AG	CT	CT	GT	GG	AT	GT	TT	CC	CT	GG
9._GC-01-113-6-10	CG	CT	GG	AG	CT	CT	GT	GG	AT	GT	TT	CC	CT	GG
10._PNG_296	_	CT	_	AG	_	CT	_	_	_	GT	_	_	CT	GG
11._PNG_296	_	CT	_	AG	_	CT	_	_	_	GT	_	_	CT	GG
12._PNG_296	_	CT	_	AG	_	CT	_	_	_	GT	_	_	CT	GG
13._RUQ_1299	_	GG	GG	AG	_	AG	AC	GG	_	AA	AA	GG	AG	GG

	43
_Input profile	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._PNG_296	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._PNG_296	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_1299	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._GC-01-113-6-10	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._GC-01-113-6-10	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._RUQ_1299	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._GC-01-113-6-10	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._GC-01-113-6-10	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._GC-01-113-6-10	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._PNG_296	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._PNG_296	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._PNG_296	AG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._RUQ_1299	GG	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: PNG_296 RUQ_1299

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PNG_296

97.9 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1610 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._PNG_296

97.9 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1610 2

Dapeng Zhang, 2016

3._PNG_296 RUQ_1299

97.9 %
24 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

4._PNG_296 GC-01-113-6-10

96.5 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

5._PNG_296 GC-01-113-6-10

96.5 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2

6._PNG_296 RUQ_1299

94.1 %
17 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

7._PNG_296 GC-01-113-6-10

80.2 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

8._PNG_296 GC-01-113-6-10

80.2 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

9._PNG_296 GC-01-113-6-10

80.2 %
43 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

10._PNG_296

77.1 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1610 3

Dapeng Zhang, 2016

11._PNG_296

77.1 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1610 4

Dapeng Zhang, 2016

12._PNG_296

77.1 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 1610 5

Dapeng Zhang, 2016

13._PNG_296 RUQ_1299

44.6 %
37 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP999	34	TcSNP1060	35	TcSNP1063
36	TcSNP1111	37	TcSNP1126	38	TcSNP1253	39	TcSNP1309	40	TcSNP1439
41	TcSNP1442	42	TcSNP1458	43	TcSNP1484